![]() You can check it out by trying: type(df.index) Pandas will try to guess the date format. If you don't have it yet, but luckily you do have a column with dates, just make it as your index. So, let's get started:Īssume you have a pandas DataFrame. To calculate z-scores for the whole time-series, you have to know the means and standard deviations for each day of the year. For example, you have 10 years of temperature data measured weekly. When we are dealing with time-series, calculating z-scores (or anomalies - not the same thing, but you can adapt this code easily) is a bit more complicated. Result reproduced using scipy.stats zscore In : from scipy.stats import zscore RandomA_zscore randomB_zscore randomC_zscore # make sure you filter or select columns of interest before passing dataframe to function # Create custom function to compute Zscore In : df = pd.DataFrame(np.random.randn(5,3), columns=) Here's other way of getting Zscore using custom function: In : import pandas as pd import numpy as np Numeric_cols = df.select_dtypes(include=).columns If not all the columns of your data frame are numeric, then you can apply the Z-score function only to the numeric columns using the select_dtypes function: # Note that `select_dtypes` returns a data frame. Using Scipy's zscore function: df = pd.DataFrame(np.random.randint(100, 200, size=(5, 3)), columns=) If indexing is a crucial part of solving this problem, please dumb down your explanation of indexing. SIDENOTE: there is a concept in pandas called "indexing" which intimidates me because I do not understand it well. So basically how can I compute z-scores for each column (ignoring NaN values) and push everything into a new dataframe? I'm interested in applying this solution to all of my columns except the ID column to produce a new dataframe which I can save as an Excel file using df2.to_excel("Z-Scores.xlsx") Some of my columns contain NaN values which I do not want to include into the z-score calculations so I intend to use a solution offered to this question: how to zscore normalize pandas column with nans? df = (df.a - df.a.mean())/df.a.std(ddof=0) Here's a subsection of it: ID Age BMI Risk Factor I have a dataframe containing a single column of IDs and all other columns are numerical values for which I want to compute z-scores.
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